miRBase entry: dse-mir-92b

Stem-loop dse-mir-92b


Accession
MI0009336
Description
Drosophila sechellia dse-mir-92b precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

aacgucaccugauguaggccgugcccagugcuuauuuguugccuuuucgaaauacaAAUUGCACUAGUCCCGGCCUGCagugagugucgca
..((.(((....(((((((((.(.(.(((((..((((((..............)))))).))))).).).)))))))))....))).))..

Structure
aa  u   cuga         u c c     uu      ugccuu 
  cg cac    uguaggccg g c agugc  auuugu      u
  || |||    ||||||||| | | |||||  ||||||       
  gc gug    aCGUCCGGC C G UCACG  UAAaca      u
ac  u   agug         C U A     -U      uaaagc 


Annotation confidence Not enough data
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Genome context
scaffold_13: 263931-264021 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dse-mir-92b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dse-miR-92b

Accession MIMAT0008774
Description Drosophila sechellia dse-miR-92b mature miRNA
Sequence 57 - AAUUGCACUAGUCCCGGCCUGC - 78
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218