miRBase entry: dpe-mir-92b

Stem-loop dpe-mir-92b

Accession

MI0009314

Description

Drosophila persimilis dpe-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Sequence

aacgucaccugauguaggccgugcccagugcuuauuugucguuguuugaaaauacaAAUUGCACUAGUCCCGGCCUGCagagagugucgca
..((.(((((..(((((((((.(.(.(((((..((((((.(((.......))))))))).))))).).).))))))))).)).))).))..

Structure

aa  u   -  ga         u c c     uu      c   gu 
  cg cac cu  uguaggccg g c agugc  auuugu guu  u
  || ||| ||  ||||||||| | | |||||  |||||| |||  u
  gc gug ga  aCGUCCGGC C G UCACG  UAAaca uaa  g
ac  u   a  -g         C U A     -U      -   aa

Annotation confidence Not enough data

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Genome context

scaffold_3: 6405664-6405754 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dpe-mir-92b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpe-miR-92b

Accession	MIMAT0008756
Description	Drosophila persimilis dpe-miR-92b mature miRNA
Sequence	57 - AAUUGCACUAGUCCCGGCCUGC - 78
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218