miRBase entry: dpe-mir-87

Stem-loop dpe-mir-87


Accession
MI0009287
Description
Drosophila persimilis dpe-mir-87 precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

cauauuucauucgcgccuguaucuugcugaaccguagccauaauggucuuucaucccggUUGAGCAAAAUUUCAGGUGUGugagaaauuuguu
((.(((((.(.((((((((.((.(((((.(((((..((((...)))).........))))).))))).))..)))))))).).))))).))..

Structure
--  u     a u        -u  c     g     -------ua    u 
  ca auuuc u cgcgccug  au uugcu aaccg         gcca  
  || ||||| | ||||||||  || ||||| |||||         |||| a
  gu uaaag g GUGUGGAC  UA AACGA UUggc         uggu  
uu  u     a u        UU  A     G     ccuacuuuc    a 


Annotation confidence Not enough data
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Genome context
scaffold_1: 1694922-1695014 [+]

Database links

Mature dpe-miR-87

Accession MIMAT0008733
Description Drosophila persimilis dpe-miR-87 mature miRNA
Sequence 60 - UUGAGCAAAAUUUCAGGUGUG - 80
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218