miRBase entry: dpe-mir-280

Stem-loop dpe-mir-280


Accession
MI0009276
Description
Drosophila persimilis dpe-mir-280 precursor miRNA
Gene family
MIPF0000240; mir-280


Sequence

ggcuuuuaUGUAUUUACGUUGCAUAUGAAAUGAUAuuuauaguaaacagauuauuuuauaugcagguaugugcagcugaagagccug
(((((((.(((((.(((.((((((((((((((((...............))))))))))))))))))).)))))....)))))))..

Structure
--       ---a     U   G                Auuuau 
  ggcuuuu    UGUAU UAC UUGCAUAUGAAAUGAU      a
  |||||||    ||||| ||| ||||||||||||||||      g
  ccgagaa    acgug aug gacguauauuuuauua      u
gu       gucg     u   -                gacaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_2: 2339760-2339846 [+]

Database links

Mature dpe-miR-280

Accession MIMAT0008722
Description Drosophila persimilis dpe-miR-280 mature miRNA
Sequence 9 - UGUAUUUACGUUGCAUAUGAAAUGAUA - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218