miRBase entry: dpe-mir-283

Stem-loop dpe-mir-283


Accession
MI0009267
Description
Drosophila persimilis dpe-mir-283 precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

acgauucucaaaggUAAAUAUCAGCUGGUAAUUCUgggagcuaagcaagauaugaaacacucggaauuucaguugguaucgacuuuuuugaauu
..(((((..((((((..(((((((((((.(((((((((.....................))))))))))))))))))))..))))))..)))))

Structure
ac     uc      AA           U         agcuaagca 
  gauuc  aaaggU  AUAUCAGCUGG AAUUCUggg         a
  |||||  ||||||  ||||||||||| |||||||||         g
  uuaag  uuuuca  uaugguugacu uuaaggcuc         a
--     uu      gc           -         acaaaguau 


Annotation confidence Not enough data
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Genome context
scaffold_26: 1090726-1090819 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dpe-mir-283
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dpe-miR-283

Accession MIMAT0008713
Description Drosophila persimilis dpe-miR-283 mature miRNA
Sequence 15 - UAAAUAUCAGCUGGUAAUUCU - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218