Stem-loop sequence dmo-mir-79

AccessionMI0009244 (change log)
DescriptionDrosophila mojavensis miR-79 stem-loop
Gene family MIPF0000014; mir-9
Stem-loop
   uu    u        cgc       g     uagauu 
5'   gccg ugcuuugg   uuuagcu uauga      u
     |||| ||||||||   ||||||| |||||       
3'   cggu acgaaacc   agaucga auacu      a
   cu    u        auu       a     ucauaa 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dmoj_r1.3_FB2010_02) Overlapping transcripts
scaffold_6500: 7202139-7202214 [+]
intergenic
Clustered miRNAs
< 10kb from dmo-mir-79
dmo-mir-9cscaffold_6500: 7201345-7201433 [+]
dmo-mir-306scaffold_6500: 7201957-7202027 [+]
dmo-mir-79scaffold_6500: 7202139-7202214 [+]
dmo-mir-9bscaffold_6500: 7202307-7202395 [+]
Database links

Mature sequence dmo-miR-79

Accession MIMAT0008690
Sequence

49 - 

uaaagcuagauuaccaaagcau

 - 70

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Evidence by similarity; MI0000374

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).