miRBase entry: dgr-mir-283

Stem-loop dgr-mir-283

Accession

MI0009169

Description

Drosophila grimshawi dgr-mir-283 precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

ccgauucucaaaggUAAAUAUCAGCUGGUAAUUCUgggagcaaugccaaauaugaaacacucggaauuucaguugguaucgacuuuuuugaauu
..(((((..((((((..(((((((((((.(((((((((.....................))))))))))))))))))))..))))))..)))))

Structure

cc     uc      AA           U         agcaaugcc 
  gauuc  aaaggU  AUAUCAGCUGG AAUUCUggg         a
  |||||  ||||||  ||||||||||| |||||||||         a
  uuaag  uuuuca  uaugguugacu uuaaggcuc         a
--     uu      gc           -         acaaaguau

Annotation confidence Not enough data

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Genome context

scaffold_14853: 6953521-6953614 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dgr-mir-283

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dgr-miR-283

Accession	MIMAT0008618
Description	Drosophila grimshawi dgr-miR-283 mature miRNA
Sequence	15 - UAAAUAUCAGCUGGUAAUUCU - 35
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218