miRBase entry: dgr-mir-304

Stem-loop dgr-mir-304


Accession
MI0009137
Description
Drosophila grimshawi dgr-mir-304 precursor miRNA
Gene family
MIPF0000308; mir-304


Sequence

gcagcauugaaUAAUCUCAAUUUGUAAAUGUGAGcgauuauuaagaauuugacgcacucacuuugcaauuggagauugcucgagauugc
((((..((((.(((((((...(((((((.(((((((.(((.........))))))..)))))))))))...))))))).))))..))))

Structure
    ca    a       AAU       U    --   a   uua 
gcag  uuga UAAUCUC   UUGUAAA GUGA  Gcg uua   a
||||  |||| |||||||   ||||||| ||||  ||| |||   g
cguu  agcu guuagag   aacguuu cacu  cgc agu   a
    ag    c       guu       -    ca   -   uua 


Annotation confidence Not enough data
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Genome context
scaffold_14853: 6952289-6952377 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dgr-mir-304
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dgr-miR-304

Accession MIMAT0008595
Description Drosophila grimshawi dgr-miR-304 mature miRNA
Sequence 12 - UAAUCUCAAUUUGUAAAUGUGAG - 34
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218