miRBase entry: dgr-mir-276b

Stem-loop dgr-mir-276b


Accession
MI0009116
Description
Drosophila grimshawi dgr-mir-276b precursor miRNA
Gene family
MIPF0000124; mir-276


Sequence

aacgaagucuauuuaccauUAGCGAGGUAUAGAGUUCCUACGugcaaauugcaauaaucgUAGGAACUUAAUACCGUGCUCUuggagggcugucgac
..((((((((.....(((..((((.(((((.(((((((((((((((...)))).....))))))))))).))))).))))..))).))))).)))..

Structure
aa   -     auuua   uU    A     A           -----    a 
  cga agucu     cca  AGCG GGUAU GAGUUCCUACG     ugca  
  ||| |||||     |||  |||| ||||| |||||||||||     |||| a
  gcu ucggg     ggu  UCGU CCAUA UUCAAGGAUgc     acgu  
ca   g     ----a   UC    G     A           uaaua    u 


Annotation confidence Not enough data
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Genome context
scaffold_15110: 12572332-12572428 [-]

Database links

Mature dgr-miR-276b-5p

Accession MIMAT0008573
Description Drosophila grimshawi dgr-miR-276b-5p mature miRNA
Sequence 20 - UAGCGAGGUAUAGAGUUCCUACG - 42
Evidence not_experimental

Mature dgr-miR-276b-3p

Accession MIMAT0008574
Description Drosophila grimshawi dgr-miR-276b-3p mature miRNA
Sequence 61 - UAGGAACUUAAUACCGUGCUCU - 82
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218