miRBase entry: dgr-mir-305

Stem-loop dgr-mir-305

Accession

MI0009101

Description

Drosophila grimshawi dgr-mir-305 precursor miRNA

Gene family

MIPF0000158; mir-305

Sequence

caugucuAUUGUACUUCAUCAGGUGCUCUGgugucacucguaacccggcacauguugaaguacacucaauaug
(((((....(((((((((.((.(((((..(((..(....)..))).))))).)).)))))))))....)))))

Structure

     cuAU         U  G     CU   gu a 
caugu    UGUACUUCA CA GUGCU  Ggu  c c
|||||    ||||||||| || |||||  |||  |  
guaua    acaugaagu gu cacgg  cca  g u
     acuc         u  a     -c   au c

Annotation confidence Not enough data

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Genome context

scaffold_15126: 5008545-5008617 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dgr-mir-305

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dgr-miR-305

Accession	MIMAT0008558
Description	Drosophila grimshawi dgr-miR-305 mature miRNA
Sequence	8 - AUUGUACUUCAUCAGGUGCUCUG - 30
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218