Stem-loop der-mir-9c

Accession

MI0009097

Description

Drosophila erecta der-mir-9c precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

auuuuugcuguuUCUUUGGUAUUCUAGCUGUAGAuuguuucgcgcacauuguauaucaucuaaagcuuuuauaccaaagcuccagcuuaaau
((((..((((...(((((((((...((((.(((((.(....(((.....)))....)))))).))))...)))))))))...))))..))))

Structure

    uu    uuU         UCU    G     u uuuc   c 
auuu  gcug   CUUUGGUAU   AGCU UAGAu g    gcg a
||||  ||||   |||||||||   |||| ||||| |    ||| c
uaaa  cgac   gaaaccaua   ucga aucua c    ugu a
    uu    cuc         uuu    a     - uaua   u 

Annotation confidence Not enough data

Genome context

scaffold_4845: 19767535-19767626 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from der-mir-9c

Mature der-miR-9c

• Accession: MIMAT0008554
• Description: Drosophila erecta der-miR-9c mature miRNA
• Sequence: 13 - UCUUUGGUAUUCUAGCUGUAGA - 34
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218