miRBase entry: der-mir-12

Stem-loop der-mir-12


Accession
MI0009072
Description
Drosophila erecta der-mir-12 precursor miRNA
Gene family
MIPF0000181; mir-12


Sequence

uacgguUGAGUAUUACAUCAGGUACUGGUgugccuuaaaaccaacaaccaguacuuaugucauacuacgccgug
((((((..(((((.((((.((((((((((((............)).)))))))))))))).)))))..))))))

Structure
      UG     U    C          -  gccuu 
uacggu  AGUAU ACAU AGGUACUGGU gu     a
||||||  ||||| |||| |||||||||| ||      
gugccg  ucaua ugua uucaugacca ca     a
      ca     c    -          a  accaa 


Annotation confidence Not enough data
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Genome context
scaffold_4690: 11630953-11631026 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from der-mir-12
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-12

Accession MIMAT0008531
Description Drosophila erecta der-miR-12 mature miRNA
Sequence 7 - UGAGUAUUACAUCAGGUACUGGU - 29
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218