miRBase entry: der-let-7

Stem-loop der-let-7


Accession
MI0009025
Description
Drosophila erecta der-let-7 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

ucuggcaaauUGAGGUAGUAGGUUGUAUAGUaguaauuacacaucauacuauacaaugugcuagcuuucuuugcuuga
((.((((((..(((.(((((.(((((((((((..............))))))))))).))))).)))..)))))).))

Structure
  u      uU   G     G           guaauu 
uc ggcaaa  GAG UAGUA GUUGUAUAGUa      a
|| ||||||  ||| ||||| |||||||||||       
ag ucguuu  uuc aucgu uaacauaucau      c
  u      cu   g     g           acuaca 


Annotation confidence Not enough data
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Genome context
scaffold_4845: 5799416-5799493 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from der-let-7
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-let-7

Accession MIMAT0008486
Description Drosophila erecta der-let-7 mature miRNA
Sequence 11 - UGAGGUAGUAGGUUGUAUAGU - 31
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218