miRBase entry: dan-mir-311b

Stem-loop dan-mir-311b

Accession

MI0009013

Description

Drosophila ananassae dan-mir-311b precursor miRNA

Gene family

MIPF0000566; mir-310

Sequence

cauuuccagacugugguuugggcagauacuacauuuuaggaucagUAUUGCACAUUCCCCAGCCUGGaaa
..(((((((.(((.((..((.((((.((((.............)))))))).))..)).))).)))))))

Structure

ca       a   u  uu  g    a    acauu 
  uuuccag cug gg  ug gcag uacu     u
  ||||||| ||| ||  || |||| ||||     u
  aaaGGUC GAC CC  AC CGUU AUga     a
--       C   C  UU  A    -    cuagg

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_13266: 4132538-4132607 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from dan-mir-311b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-311b

Accession	MIMAT0008475
Description	Drosophila ananassae dan-miR-311b mature miRNA
Sequence	46 - UAUUGCACAUUCCCCAGCCUGG - 67
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218