miRBase entry: dan-mir-1

Stem-loop dan-mir-1


Accession
MI0008968
Description
Drosophila ananassae dan-mir-1 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

agccuuugagaguuccaugcuuccuugcauucaauaguauaauaucaagcauaUGGAAUGUAAAGAAGUAUGGAGcgaaaucuggcaa
.(((.......((((((((((((.((((((((.(((((..........)).))).)))))))).)))))))))))).......)))..

Structure
-a   uuugaga            c        a   -  auaa 
  gcc       guuccaugcuuc uugcauuc aua gu    u
  |||       |||||||||||| |||||||| ||| ||     
  cgg       cGAGGUAUGAAG AAUGUAAG Uau cg    a
aa   ucuaaag            A        G   a  aacu 


Annotation confidence Not enough data
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Genome context
scaffold_12916: 6985825-6985912 [+]

Database links

Mature dan-miR-1

Accession MIMAT0008432
Description Drosophila ananassae dan-miR-1 mature miRNA
Sequence 54 - UGGAAUGUAAAGAAGUAUGGAG - 75
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218