miRBase entry: dan-mir-287

Stem-loop dan-mir-287


Accession
MI0008961
Description
Drosophila ananassae dan-mir-287 precursor miRNA
Gene family
MIPF0000224; mir-287


Sequence

uugguagugggucugaaauuuugcacacauuuacaauaauuguaaaUGUGUUGAAAAUCGUUUGCACaacugu
..(((.(((.(..(((..((((..((((((((((((...))))))))))))..)))))))..).))).)))..

Structure
uu   a   g uc   aa    gc            u 
  ggu gug g  uga  uuuu  acacauuuacaa  
  ||| ||| |  |||  ||||  |||||||||||| a
  uca CAC U  GCU  AAAA  UGUGUaaauguu  
ug   a   G UU   --    GU            a 


Annotation confidence Not enough data
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Genome context
scaffold_12916: 3302459-3302531 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dan-mir-287
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-miR-287

Accession MIMAT0008424
Description Drosophila ananassae dan-miR-287 mature miRNA
Sequence 47 - UGUGUUGAAAAUCGUUUGCAC - 67
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218