miRBase entry: dan-mir-277

Stem-loop dan-mir-277

Accession

MI0008944

Description

Drosophila ananassae dan-mir-277 precursor miRNA

Gene family

MIPF0000156; mir-277

Sequence

uugaagguuuugggcugcgugucaggagugcauuugcacugaaacauucugaagcuugUAAAUGCACUAUCUGGUACGACAuuccagaacguacaauc
(((.(.((((((((.(((((((((((((((((((((((((............))..)))))))))))).))))))))).)).)))))))).).)))..

Structure

--   a g        c  -         -            --  gaaac 
  uug a guuuuggg ug cgugucagg agugcauuugca  cu     a
  ||| | |||||||| || ||||||||| ||||||||||||  ||      
  aac u caagaccu AC GCAUGGUCU UCACGUAAAUgu  ga     u
cu   a g        u  A         A            uc  agucu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_13340: 6488996-6489093 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dan-mir-277

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-277

Accession	MIMAT0008407
Description	Drosophila ananassae dan-miR-277 mature miRNA
Sequence	59 - UAAAUGCACUAUCUGGUACGACA - 81
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218