Stem-loop sequence tca-mir-137

Accession

MI0008915 (change log)

Description

Tribolium castaneum miR-137 stem-loop

Gene family

MIPF0000106; mir-137

Literature search

1 open access papers mention tca-mir-137
(1 sentences)

Stem-loop

   ug  ug uc           ug      u    ca au 
5'   gu  g  acguguauucu  gguaau aaca  u  u
     ||  |  |||||||||||  |||||| ||||  |   
3'   ca  c  ugcacauaaga  ucguua uugu  g  c
   aa  gu ga           gu      -    ag ga 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Tcas4.0): ChLG7: 3688025-3688101 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir137
• miRBase Tracker:MI0008915

Mature sequence tca-miR-137-5p

• Accession: MIMAT0019117
• Sequence: 10 - acguguauucuuggguaauuaacac - 34
• Evidence: experimental; SOLID [2]
• Database links:
  • RNAcentral:URS0000182F90_7070

Mature sequence tca-miR-137-3p

• Accession: MIMAT0008373
• Previous IDs: tca-miR-137
• Sequence: 48 - uuauugcuugagaauacacgua - 69
• Evidence: experimental; SOLID [2]
• Database links:
  • RNAcentral:URS0000601DD7_7070

References

1. PMID:18651924 "In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)" Singh J, Nagaraju J Insect Mol Biol. 17:427-436(2008).
2. PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).