miRBase entry: tca-mir-124

Stem-loop tca-mir-124


Accession
MI0008912
Description
Tribolium castaneum tca-mir-124 precursor miRNA
Gene family
MIPF0000021; mir-124


Sequence

gucauucuccuAGUGUUCACUGUUGGCCUGUAUguuuuuguaacgcaUAAGGCACGCGGUGAAUGCCAAGagcagacuu
(((...(((...(((((((((((..((((.(((((.........)))))))))..)))))))))))...)))..)))..

Structure
--   auu   cuA           UG    G     uuu 
  guc   cuc   GUGUUCACUGU  GCCU UAUgu   u
  |||   |||   |||||||||||  |||| |||||   g
  cag   gaG   CGUAAGUGGCG  CGGA AUacg   u
uu   -ac   AAC           CA    -     caa 


Annotation confidence Not enough data
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Genome context
ChLG5: 13288829-13288907 [-]

Database links

Mature tca-miR-124-3p

Accession MIMAT0008370
Description Tribolium castaneum tca-miR-124-3p mature miRNA
Sequence 48 - UAAGGCACGCGGUGAAUGCCAAG - 70
Evidence experimental
SOLID [2]
Database links

Mature tca-miR-124-5p

Accession MIMAT0019114
Description Tribolium castaneum tca-miR-124-5p mature miRNA
Sequence 12 - AGUGUUCACUGUUGGCCUGUAU - 33
Evidence experimental
SOLID [2]
Database links

References

  1. PubMed ID: 18651924
    In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)
    "Singh J, Nagaraju J"
    "Insect Mol Biol (2008) 17:427-436

  2. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696