Stem-loop sequence tca-mir-8

Accession

MI0008898 (change log)

Description

Tribolium castaneum miR-8 stem-loop

Gene family

MIPF0000019; mir-8

Literature search

1 open access papers mention tca-mir-8
(4 sentences)

Stem-loop

   acuguua       -   g     c      uuacau 
5'        acaucuu acc ggcag auuaga      u
          ||||||| ||| ||||| ||||||       
3'        uguagaa ugg cuguc uaaucu      u
   --ccucc       a   a     a      ucauau 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Database links

• EntrezGene:Mir8
• miRBase Tracker:MI0008898

Mature sequence tca-miR-8-5p

• Accession: MIMAT0019100
• Sequence: 9 - caucuuaccgggcagcauuaga - 30
• Evidence: experimental; SOLID [2]
• Database links:
  • RNAcentral:URS00003C2D16_7070

Mature sequence tca-miR-8-3p

• Accession: MIMAT0008356
• Previous IDs: tca-miR-8
• Sequence: 47 - uaauacugucagguaaagauguc - 69
• Evidence: experimental; SOLID [2]
• Database links:
  • RNAcentral:URS0000562752_7070

References

1. PMID:18651924 "In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)" Singh J, Nagaraju J Insect Mol Biol. 17:427-436(2008).
2. PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).