miRBase entry: ptr-mir-628

Stem-loop ptr-mir-628


Accession
MI0008824
Description
Pan troglodytes ptr-mir-628 precursor miRNA
Gene family
MIPF0000529; mir-628


Sequence

auagcuguugugucacuuccucaugcugacauauuuacuagaggguaaaauuaauaaccuUCUAGUAAGAGUGGCAGUCGAagggaagggcuca
........((.(((.((((((...((((.(((.(((((((((((((..........))))))))))))).))).))))....))))))))).))

Structure
auagcugu  u   a      -cau    a   a             aaaa 
        ug guc cuuccu    gcug cau uuuacuagagggu    u
        || ||| ||||||    |||| ||| |||||||||||||     
        ac cgg gaaggg    UGAC GUG GAAUGAUCUucca    u
--------  u   -      aAGC    G   A             auaa 


Annotation confidence Not enough data
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Genome context
chr15: 36168583-36168676 [-]

Database links

Mature ptr-miR-628

Accession MIMAT0008287
Description Pan troglodytes ptr-miR-628 mature miRNA
Sequence 61 - UCUAGUAAGAGUGGCAGUCGA - 81
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70