miRBase entry: ptr-mir-320b-1

Stem-loop ptr-mir-320b-1


Accession
MI0008608
Description
Pan troglodytes ptr-mir-320b-1 precursor miRNA
Gene family
MIPF0000163; mir-320

Literature search
1 open access papers mention ptr-mir-320b-1
(8 sentences)

Sequence

aauuaaucccucucuuucuaguucuuccuagagugaggAAAAGCUGGGUUGAGAGGGCAAacaaauuaacuaauuaau
........((((...((((((......)))))).))))........((((((...(.....)...)))))).......

Structure
aauuaaucccucucuuucuaguucuuccuagagugaggAAAAGCUG      GAG G 
                                              GGUUGA   G C
                                              ||||||   | A
                                              ucaauu   c A
---------------------------------------uaauuaa      aaa a 


Annotation confidence Not enough data
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Genome context
chr1: 119168471-119168548 [-]

Database links

Mature ptr-miR-320b

Accession MIMAT0008094
Description Pan troglodytes ptr-miR-320b mature miRNA
Sequence 39 - AAAAGCUGGGUUGAGAGGGCAA - 60
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70