Stem-loop sequence xla-mir-92a-2

Accession

MI0008389 (change log)

Description

Xenopus laevis miR-92a-2 stem-loop

Gene family

MIPF0000013; mir-25

Literature search

2 open access papers mention xla-mir-92a-2
(2 sentences)

Stem-loop

     c    ug   g     uu  u   c     -gu  u 
5' uc ucug  ggu gggau  gu gca uacuu   gu u
   || ||||  ||| |||||  || ||| |||||   ||  
3' ag aggu  ccg cccug  ca cgu augaa   ua u
     u    gu   g     uu  -   u     aau  u 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (JGIv8.0): chr8L: 48821825-48821900 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from xla-mir-92a-2

• xla-mir-106: chr8L: 48822350-48822405 [-]
• xla-mir-18a-1: chr8L: 48822216-48822294 [-]
• xla-mir-20: chr8L: 48822066-48822139 [-]
• xla-mir-19b: chr8L: 48821956-48822028 [-]
• xla-mir-92a-2: chr8L: 48821825-48821900 [-]
• xla-mir-363: chr8L: 48821690-48821777 [-]

Database links

• miRBase Tracker:MI0008389

Mature sequence xla-miR-92a-3p

• Accession: MIMAT0011149
• Sequence: 49 - uauugcacuugucccggccugu - 70
• Evidence: by similarity; MI0003106

References

1. " Biasci D, Giudetti G, Barsacchi G, Andreazzoli M Unpublished (2008).