Stem-loop sequence sly-MIR1917

AccessionMI0008352 (change log)
DescriptionSolanum lycopersicum miR1917 stem-loop
Literature search

2 open access papers mention sly-MIR1917
(7 sentences)

Stem-loop 
   u          uuaaau         ---a   a  ag g            c gg    a   aa ug 
5'  uuuagcggca      auugacauu    aua ag  u cuaaagucuuua c  uauu guu  g  u
    ||||||||||      |||||||||    ||| ||  | |||||||||||| |  |||| |||  |   
3'  aaaucgccgu      uaacuguga    uau uc  g gauuucggaaau g  guaa caa  u  c
   a          ------         gaaa   a  ca g            c au    c   ga ua
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (SL2.50; GCA_000188115.2) Overlapping transcripts
chr8: 52099541-52099671 [-]
intergenic
Database links

Mature sequence sly-miR1917

Accession MIMAT0007909
Sequence

24 -  

auuaauaaagagugcuaaagu

 - 44

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Evidence experimental; 454 [1]

References

1
PMID:18653800 "Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening" Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T Genome Res. 18:1602-1609(2008).