miRBase entry: bmo-mir-133

Stem-loop bmo-mir-133


Accession
MI0008345
Description
Bombyx mori bmo-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133

Literature search
8 open access papers mention bmo-mir-133
(15 sentences)

Sequence

10 reads, 4 reads per million, 1 experiments
aaagcgagagcguuguucgcuuuagcugguugacuucgggucaaauugucauuuucauaucauUUGGUCCCCUUCAACCAGCUGUaguuaacaucugcuuu
......((((((.((((.(((.(((((((((((....(((((((((...............)))))).)))..))))))))))).))).))))..))))))

Structure
aaagcg      -u    c   u           cuuc   -      ugucau 
      agagcg  uguu gcu uagcugguuga    ggg ucaaau      u
      ||||||  |||| ||| |||||||||||    ||| ||||||      u
      uuucgu  acaa uga GUCGACCAACU    CCC GGUUua      u
------      cu    u   U           --UC   U      cuauac 


Annotation confidence Not enough data
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Genome context
NW_004582020.1: 5611904-5612004 [-]

Database links

Mature bmo-miR-133

Accession MIMAT0007901
Description Bombyx mori bmo-miR-133 mature miRNA
Sequence 64 - UUGGUCCCCUUCAACCAGCUGU - 85
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18507836
    Identification and characteristics of microRNAs from Bombyx mori
    He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y
    BMC Genomics (2008) 9:248

  2. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148