miRBase entry: aga-mir-375

Stem-loop aga-mir-375


Accession
MI0008310
Description
Anopheles gambiae aga-mir-375 precursor miRNA
Gene family
MIPF0000114; mir-375

Literature search
4 open access papers mention aga-mir-375
(5 sentences)

Sequence

uguugcgaugagacagaauuuggauuacuuaagccacgcguacagaaacuuuuuagaaugaaagagUUUGUUCGUUUGGCUCGAGUUAugccgguucuaaauugcagca
(((((((((.....((((((.(.((.((((.(((((.(((.(((((..(((((......)))))..))))).))).))))).)))).)).).))))))..)))))))))

Structure
         gagac      u g  u    a     c   u     aa     ua 
uguugcgau     agaauu g au acuu agcca gcg acaga  cuuuu  g
|||||||||     |||||| | || |||| ||||| ||| |||||  |||||   
acgacguua     ucuugg c uA UGAG UCGGU UGC UGUUU  gaaag  a
         ---aa      c g  U    C     U   U     ga     ua 


Annotation confidence Not enough data
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Comments
This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context
chr3R: 51640560-51640668 [-]

Database links

Mature aga-miR-375

Accession MIMAT0007860
Description Anopheles gambiae aga-miR-375 mature miRNA
Sequence 67 - UUUGUUCGUUUGGCUCGAGUUA - 88
Evidence not_experimental

References

  1. PubMed ID: 18500992
    Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
    Mead EA, Tu Z
    BMC Genomics (2008) 9:244