miRNA Entry for MI0008306

Stem-loop sequence aga-mir-11

Accession

MI0008306 (change log)

Description

Anopheles gambiae miR-11 stem-loop

Gene family

MIPF0000252; mir-11

Literature search

3 open access papers mention aga-mir-11
(6 sentences)

Stem-loop

   g    c          ug  a       cugugugguuauuagc 
5'  cauc ggcaagaacu  ga cugugau                c
    |||| ||||||||||  || |||||||                g
3'  guag ucguucuuga  cu gacacua                c
   g    c          gu  -       cacuucucgaagcuug

Get sequence

Confidence

Annotation confidence: not enough data

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Comments

This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context

Coordinates (AgamP3; GCA_000005575.1)	Overlapping transcripts
chr2R: 13042022-13042111 [+]	intergenic

Clustered miRNAs

< 10kb from aga-mir-11
aga-mir-11	chr2R: 13042022-13042111 [+]
aga-mir-998	chr2R: 13042402-13042472 [+]

Database links

miRBase Tracker:MI0008306

Mature sequence aga-miR-11
Accession	MIMAT0007856
Sequence	63 - caucacagucugaguucuugcu - 84 Get sequence
Evidence	not experimental

References
1	PMID:18500992 "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi" Mead EA, Tu Z BMC Genomics. 9:244(2008).

miRBase

Stem-loop sequence aga-mir-11

Mature sequence aga-miR-11

References