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miRBase |
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Stem-loop sequence osa-MIR812j |
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Accession | MI0008299 (change log) | ||||
Description | Oryza sativa miR812j stem-loop | ||||
Gene family | MIPF0000345; MIR812 | ||||
Literature search |
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10 open access papers mention osa-MIR812j | ||||
Stem-loop |
aga u --- ------ --g uc c u ug -- uuu aaaaacuaaaaaacacaagucacgcauaaacuacu 5' g gca ucc uuggucuu gauaguacu cuuuguc caaaauaagcguagccaugaguuuuc uguccaacuuuaau uucgucuuauuu aauuuuu uga a | ||| ||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||| u 3' c cgu agg gacuagaa uuaucauga gaggcag guuuuauuugcgucgguacucaaagg acagguugaaauua aggcagaauaaa uuaaaaa acu u --a - aaa uugauc agg ga u c gu cu cau aaucauaaaaauaacaauaaucuaauauuuuguac |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence osa-miR812j |
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Accession | MIMAT0007850 |
Sequence |
200 - aagacggaugauuaaaguuggaca - 223 |
Deep sequencing | 2494 reads, 2 experiments |
Evidence | experimental; 454 [1] |
Database links |
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References |
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1 |
PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"
Genome Res. 18:1456-1465(2008).
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