miRBase entry: osa-MIR1855

Stem-loop osa-MIR1855


Accession
MI0008232
Description
Oryza sativa osa-MIR1855 precursor miRNA


Sequence

ccuccccauuucuuggccuccucucgcugcuccugcuugugcucugagccccaacugcucaugcucgugcucaaggaggAGCACUGGAGUAGCCAAGAGAuggagugcga
.....((((((((((((...((((.(.(((((((.((((.((..(((((.............))))).)).)))).)))))))).))))..)))))))))))).......

Structure
--ccucc            cuc    c c       g    u  uc     cccaa 
       ccauuucuuggc   cucu g ugcuccu cuug gc  ugagc     c
       ||||||||||||   |||| | ||||||| |||| ||  |||||     u
       gguAGAGAACCG   GAGG C ACGAgga gaac cg  gcucg     g
agcguga            -AU    U -       g    u  -u     uacuc 


Annotation confidence Not enough data
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Genome context
Chr11: 21708971-21709080 [+]

Database links

Mature osa-miR1855

Accession MIMAT0007777
Description Oryza sativa osa-miR1855 mature miRNA
Sequence 80 - AGCACUGGAGUAGCCAAGAGA - 100
Evidence experimental
454 [1]

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465