![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence ssc-mir-30b |
|||||||
Accession | MI0008215 (change log) | ||||||
Description | Sus scrofa miR-30b stem-loop | ||||||
Gene family | MIPF0000005; mir-30 | ||||||
Literature search |
![]()
20 open access papers mention ssc-mir-30b | ||||||
Stem-loop |
uu cgu u -a uaaua 5' ucaguu guaaacaucc ac cucagcug c |||||| |||||||||| || |||||||| 3' agucga cauuuguagg ug gggucggu a -- cuu - ga uaggu |
||||||
Deep sequencing |
| ||||||
Confidence |
Annotation confidence: not enough data
| ||||||
Genome context |
|
||||||
Clustered miRNAs |
|
||||||
Database links |
Mature sequence ssc-miR-30b-5p |
|
Accession | MIMAT0007756 |
Previous IDs | ssc-miR-30b |
Sequence |
11 - uguaaacauccuacacucagcu - 32 |
Deep sequencing | 3346 reads, 15 experiments |
Evidence | experimental; cloned [1,4], 454 [2], Illumina [3,5-6] |
Mature sequence ssc-miR-30b-3p |
|
Accession | MIMAT0015269 |
Sequence |
49 - cugggagguggauguuuacuu - 69 |
Deep sequencing | 29 reads, 8 experiments |
Evidence | experimental; Illumina [3,5-6] |
References |
|
1 |
PMID:18548309
"Identification and characterization of new microRNAs from pig"
Mamm Genome. 19:570-580(2008).
|
2 |
PMID:19196471
"Cloning, characterization and expression analysis of porcine microRNAs"
BMC Genomics. 10:65(2009).
|
3 |
PMID:19917043
"MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing"
Anim Genet. 41:159-168(2010).
|
4 |
PMID:20180025
"Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue"
Mol Biol Rep. 37:3567-3574(2010).
|
5 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
|
6 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
|