Stem-loop sequence gga-mir-214

AccessionMI0008208 (change log)
DescriptionGallus gallus miR-214 stem-loop
Gene family MIPF0000062; mir-214
Literature search

4 open access papers mention gga-mir-214
(11 sentences)

Stem-loop 
   ggacu      acgga           u          aca            aacau 
5'      ggcugg     guugucaugug cugccugucu   cuugcugugcag     c
        ||||||     ||||||||||| ||||||||||   ||||||||||||     c
3'      ccgacc     caacaguacac gacggacaga   ggacgacauguc     u
   ----u      -----           u          cac            cacuc
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Deep sequencing
1721 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr8: 4658313-4658422 [+]
antisense
ENSGALT00000005010 ; DNM3-201; intron 14
Clustered miRNAs
< 10kb from gga-mir-214
gga-mir-199-2chr8: 4652464-4652571 [+]
gga-mir-214chr8: 4658313-4658422 [+]
gga-mir-214bchr8: 4658340-4658403 [-]
Database links

Mature sequence gga-miR-214

Accession MIMAT0007751
Sequence

71 -  

acagcaggcacagacaggcag

 - 91

Get sequence
Deep sequencing1161 reads, 5 experiments
Evidence experimental; Northern [1]
Predicted targets

References

1
PMID:18511220 "Identification of novel chicken microRNAs and analysis of their genomic organization" Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH Gene. 418:34-40(2008).