miRBase entry: cfa-mir-676

Stem-loop cfa-mir-676


Accession
MI0008188
Description
Canis familiaris cfa-mir-676 precursor miRNA
Gene family
MIPF0000471; mir-676


Sequence

CUCUUCAAUCUCAGGACUCGCagaauuaauggaaugccguccuaagguuggugaguu
(((.(((((((.(((((..(((............))).))))).))))))).)))..

Structure
--   U       C     UC   gaauu 
  CUC UCAAUCU AGGAC  GCa     a
  ||| ||||||| |||||  |||      
  gag gguugga uccug  cgu     a
uu   u       a     -c   aaggu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 54495387-54495443 [+]

Database links

Mature cfa-miR-676

Accession MIMAT0006762
Description Canis familiaris cfa-miR-676 mature miRNA
Sequence 1 - CUCUUCAAUCUCAGGACUCGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415