miRBase entry: cfa-mir-374b

Stem-loop cfa-mir-374b


Accession
MI0008180
Description
Canis familiaris cfa-mir-374b precursor miRNA
Gene family
MIPF0000288; mir-374


Sequence

AUAUAAUACAACCUGCUAAGUGuccuagcacuuaucagguuguauuaucauu
..(((((((((((((.(((((((....))))))).)))))))))))))....

Structure
--AU             C       c 
    AUAAUACAACCUG UAAGUGu c
    ||||||||||||| |||||||  
    uauuauguuggac auucacg u
uuac             u       a 


Annotation confidence Not enough data
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Genome context
chrX: 57550217-57550268 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-374b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-374b

Accession MIMAT0006754
Description Canis familiaris cfa-miR-374b mature miRNA
Sequence 1 - AUAUAAUACAACCUGCUAAGUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415