miRBase entry: cfa-mir-193a

Stem-loop cfa-mir-193a


Accession
MI0008159
Description
Canis familiaris cfa-mir-193a precursor miRNA
Gene family
MIPF0000082; mir-193


Sequence

UGGGUCUUUGCGGGCGAGAUGAgggugucgguucaacuggccuacaaagucccagu
((((.(((((.((((.((.((((........)))).)).)))).))))).))))..

Structure
--    U     C    G  A    ggu 
  UGGG CUUUG GGGC AG UGAg   g
  |||| ||||| |||| || ||||    
  accc gaaac uccg uc acuu   u
ug    u     a    g  a    ggc 


Annotation confidence Not enough data
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Genome context
chr9: 41316481-41316536 [-]

Database links

Mature cfa-miR-193a

Accession MIMAT0006735
Description Canis familiaris cfa-miR-193a mature miRNA
Sequence 1 - UGGGUCUUUGCGGGCGAGAUGA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415