miRBase entry: cfa-mir-369

Stem-loop cfa-mir-369


Accession
MI0008148
Description
Canis familiaris cfa-mir-369 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

aguucgaccguguuauauucgcuuuauugacuucgAAUAAUACAUGGUUGGUCUUU
((.((((((((((..((((((............))))))..)))))))))).))..

Structure
--  u          ua      cuuua 
  ag ucgaccgugu  uauucg     u
  || ||||||||||  ||||||      
  UC GGUUGGUACA  AUAAgc     u
UU  U          UA      uucag 


Annotation confidence Not enough data
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Genome context
chr8: 69294073-69294128 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from cfa-mir-369
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-369

Accession MIMAT0006727
Description Canis familiaris cfa-miR-369 mature miRNA
Sequence 36 - AAUAAUACAUGGUUGGUCUUU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415