Stem-loop cfa-mir-380

Accession

MI0008136

Description

Canis familiaris cfa-mir-380 precursor miRNA

Gene family

MIPF0000126; mir-379

Sequence

augguugaccauagaacaugcgcuagcucuaugucgUAUGUAAUAUGGUCCACGUCU
...((.(((((((..(((((((.((......)).)))))))..))))))).))....

Structure

-aug  u       ga       c  gc 
    gu gaccaua  acaugcg ua  u
    || |||||||  ||||||| ||   
    CA CUGGUAU  UGUAUgc gu  c
UCUG  C       AA       u  au 

Annotation confidence Not enough data

Genome context

chr8: 69256764-69256820 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cfa-mir-380

Mature cfa-miR-380

• Accession: MIMAT0006717
• Description: Canis familiaris cfa-miR-380 mature miRNA
• Sequence: 37 - UAUGUAAUAUGGUCCACGUCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415