Stem-loop cfa-mir-1843

Accession

MI0008123

Description

Canis familiaris cfa-mir-1843 precursor miRNA

Gene family

MIPF0001119; mir-1843

Sequence

ACUGGAGGUCUCUGUCUGGCUUaggacagcuggcuaagucugaucguuccccuccauaca
..((((((...(.(((.(((((((.........))))))).))).)....))))))....

Structure

--AC      -UCU U   U       gac 
    UGGAGG    C GUC GGCUUag   a
    ||||||    | ||| |||||||   g
    accucc    g uag cugaauc   c
acau      ccuu c   u       ggu 

Annotation confidence Not enough data

Genome context

chr7: 23539367-23539426 [+]

Mature cfa-miR-1843

• Accession: MIMAT0006706
• Description: Canis familiaris cfa-miR-1843 mature miRNA
• Sequence: 1 - ACUGGAGGUCUCUGUCUGGCUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415