Stem-loop cfa-mir-590

Accession

MI0008114

Description

Canis familiaris cfa-mir-590 precursor miRNA

Gene family

MIPF0000418; mir-590

Sequence

gagcuuauucauaaaaguacaguaugauccaguaaaccugUAAUUUUAUGUAUAAGCUAGU
.(((((((.(((((((.((((((((......)))...))))).))))))).)))))))...

Structure

--g       u       g     ---   ga 
   agcuuau cauaaaa uacag   uau  u
   ||||||| ||||||| |||||   |||   
   UCGAAUA GUAUUUU AUguc   aug  c
UGA       U       A     caa   ac 

Annotation confidence Not enough data

Genome context

chr6: 6186538-6186598 [-]

Mature cfa-miR-590

• Accession: MIMAT0006700
• Description: Canis familiaris cfa-miR-590 mature miRNA
• Sequence: 41 - UAAUUUUAUGUAUAAGCUAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415