Stem-loop cfa-mir-99a-1

Accession

MI0008075

Description

Canis familiaris cfa-mir-99a-1 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

AACCCGUAGAUCCGAUCUUGUggugaaguggacggcacaagcucgcuucuaugggucug
.(((((((((..(((.((((((.((.......)).)))))).)))..)))))))))...

Structure

--A         UC   U      g  aa 
   ACCCGUAGA  CGA CUUGUg ug  g
   |||||||||  ||| |||||| ||  u
   uggguaucu  gcu gaacac gc  g
guc         uc   c      g  ag 

Annotation confidence Not enough data

Genome context

chr31: 13258782-13258840 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-99a-1

Mature cfa-miR-99a

• Accession: MIMAT0006668
• Description: Canis familiaris cfa-miR-99a mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAUCUUGU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415