miRBase entry: cfa-mir-107

Stem-loop cfa-mir-107


Accession
MI0008072
Description
Canis familiaris cfa-mir-107 precursor miRNA
Gene family
MIPF0000024; mir-103


Sequence

agcuucuuuacaguguugccuuguggcauggaguucaAGCAGCAUUGUACAGGGCUAU
((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))..

Structure
--    u  u           c   u   a 
  agcu cu uacaguguugc uug ggc u
  |||| || ||||||||||| ||| ||| g
  UCGG GA AUGUUACGACG Aac uug g
UA    -  C           -   -   a 


Annotation confidence Not enough data
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Genome context
chr28: 4484653-4484710 [-]

Database links

Mature cfa-miR-107

Accession MIMAT0006666
Description Canis familiaris cfa-miR-107 mature miRNA
Sequence 38 - AGCAGCAUUGUACAGGGCUAU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415