miRBase entry: cfa-mir-128-2

Stem-loop cfa-mir-128-2


Accession
MI0008057
Description
Canis familiaris cfa-mir-128-2 precursor miRNA
Gene family
MIPF0000048; mir-128


Sequence

gggggccgauacacuguacgagagugaguagcaggucUCACAGUGAACCGGUCUCUUU
((((((((...((((((..((((.(........).))))))))))...))))))))..

Structure
--        aua      ac    g gag 
  gggggccg   cacugu  gaga u   u
  ||||||||   ||||||  |||| |    
  UCUCUGGC   GUGACA  CUcu g   a
UU        CAA      --    g acg 


Annotation confidence Not enough data
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Genome context
chr23: 5826463-5826520 [+]

Database links

Mature cfa-miR-128

Accession MIMAT0006633
Description Canis familiaris cfa-miR-128 mature miRNA
Sequence 38 - UCACAGUGAACCGGUCUCUUU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415