Stem-loop cfa-mir-19a

Accession

MI0008051

Description

Canis familiaris cfa-mir-19a precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

aguuuugcauaguugcacuacaagaagaauguaguUGUGCAAAUCUAUGCAAAACUGA
((((((((((((((((((((((.......))))...))))))..))))))))))))..

Structure

--            --      ---    ag 
  aguuuugcauag  uugcac   uaca  a
  ||||||||||||  ||||||   ||||  a
  UCAAAACGUAUC  AACGUG   augu  g
AG            UA      Uug    aa 

Annotation confidence Not enough data

Genome context

chr22: 42478298-42478355 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-19a

Mature cfa-miR-19a

• Accession: MIMAT0006650
• Description: Canis familiaris cfa-miR-19a mature miRNA
• Sequence: 36 - UGUGCAAAUCUAUGCAAAACUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415