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miRBase |
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Stem-loop sequence vvi-MIR845a |
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Accession | MI0007974 (change log) | ||||
Description | Vitis vinifera miR845a stem-loop | ||||
Gene family | MIPF0000543; MIR845_3 | ||||
Literature search |
4 open access papers mention vvi-MIR845a | ||||
Stem-loop |
uuucacuugauuaguuccuucaugaguuauugcaaguaaucuccaaauuuccuuagcggauuuacauugacauauucuauuauauucauuccuauccauagcacauugcaaaguaaaaac uag -uu uu -- auuccauucuugcuuggguuuuggaaccaaaauuccaucaacuaauuuaguggguaaaguugggccaucuucaauggcaucccauacaucuaaauca
5' gacuu cauuuaa gaaaau cu ucuaucaagcuc g
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3' cugaa guagauu cuuuua ga agguaguucgag u
---------------------------------------------------------------------------cggaaacaaaauaguuaaccauagucucgaucuggagaacgaauu uua cuc cc ua uagaguuugacuuuuaacaaguuuuguaucucgagguaagaaaugcccuuggcugauagggauaaccuuucgaucuuacugaaccaugaauguuagu
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence vvi-miR845a |
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Accession | MIMAT0006579 |
Sequence |
412 - uagcucugauaccaauugaua - 432 |
Deep sequencing | 4 reads, 2 experiments |
Evidence | by similarity; MI0001706 |
References |
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1 |
PMID:17721507
"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla"
Nature. 449:463-467(2007).
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