miRBase entry: mml-mir-890

Stem-loop mml-mir-890


Accession
MI0007924
Description
Macaca mulatta mml-mir-890 precursor miRNA
Gene family
MIPF0000386; mir-743


Sequence

341 reads, 4 reads per million, 9 experiments
ugcccUACUUGGAAAGGCACCAGUUacuuagauuacacguAACUGUUCCCUUUCUGAGUAGAguaaggcuua
.((((((((((((((((...(((((((...........)))))))...))))))))))))).....)))...

Structure
--u   -----             CAC       uuag 
   gcc     cUACUUGGAAAGG   CAGUUac    a
   |||     |||||||||||||   |||||||    u
   cgg     GAUGAGUCUUUCC   GUCAAug    u
auu   aaugA             CUU       caca 


Annotation confidence Not enough data
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Genome context
chrX: 139701729-139701800 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-890
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-890-5p

Accession MIMAT0006529
Description Macaca mulatta mml-miR-890-5p mature miRNA
Sequence 6 - UACUUGGAAAGGCACCAGUU - 25
Evidence experimental
Illumina [2]

Mature mml-miR-890-3p

Accession MIMAT0026913
Description Macaca mulatta mml-miR-890-3p mature miRNA
Sequence 41 - AACUGUUCCCUUUCUGAGUAGA - 62
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45