Stem-loop mml-mir-653

Accession

MI0007897

Description

Macaca mulatta mml-mir-653 precursor miRNA

Gene family

MIPF0000435; mir-653

Literature search

1 open access papers mention mml-mir-653
(3 sentences)

Sequence

3198 reads, 32 reads per million, 7 experiments

uucauuccuucaGUGUUGAAACAAUCUCUACUGaaccagcuucaaacaaaUUCACUGGAGUUUGUUUCAAUAuugcaagaaugauaagauggaagc
.((((((...((((((((((((((.(((((.((((...............)))).))))).))))))))))))))...))))))............

Structure

-----------u      cuu              U     C    ccagcu 
            ucauuc   caGUGUUGAAACAA CUCUA UGaa      u
            ||||||   |||||||||||||| ||||| ||||      c
            aguaag   guuAUAACUUUGUU GAGGU ACUU      a
cgaagguagaau      aac              U     C    aaacaa 

Annotation confidence High

Genome context

chr3: 118802354-118802449 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-653

Mature mml-miR-653-5p

• Accession: MIMAT0006494
• Description: Macaca mulatta mml-miR-653-5p mature miRNA
• Sequence: 13 - GUGUUGAAACAAUCUCUACUG - 33
• Evidence: experimental ; Illumina [2]

Mature mml-miR-653-3p

• Accession: MIMAT0026905
• Description: Macaca mulatta mml-miR-653-3p mature miRNA
• Sequence: 51 - UUCACUGGAGUUUGUUUCAAUA - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45