miRBase entry: mml-mir-519d

Stem-loop mml-mir-519d


Accession
MI0007798
Description
Macaca mulatta mml-mir-519d precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

44 reads, 7 reads per million, 3 experiments
ucccaagcugugacccuccaaagggaagcacuuucuguuuguugucugagagaaaaCAAAGUGCUUCCUUUUAGAGUGugaccgcuuggga
((((((((.((.((.(((.((((((((((((((..(((((.............))))))))))))))))))).))).)).)).))))))))

Structure
        u  g  c   c              uc     guugu 
ucccaagc gu ac cuc aaagggaagcacuu  uguuu     c
|||||||| || || ||| ||||||||||||||  |||||     u
aggguucg ca uG GAG UUUUCCUUCGUGAA  ACaaa     g
        c  g  U   A              --     agaga 


Annotation confidence Not enough data
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Genome context
chr19: 49061111-49061201 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-519d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-519d

Accession MIMAT0006387
Description Macaca mulatta mml-miR-519d mature miRNA
Sequence 57 - CAAAGUGCUUCCUUUUAGAGUG - 78
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8