miRBase entry: mml-mir-519c

Stem-loop mml-mir-519c


Accession
MI0007797
Description
Macaca mulatta mml-mir-519c precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

160 reads, 29 reads per million, 3 experiments
ucucagucugugacccucuagaaggaagcacuuucuguuguuugaaagaaaagAAAGUGCAUCAUUUUAGAGGAUuacaguuugaga
((((((.((((((.(((((((((.((.(((((((((.((.((...)).)).))))))))).)).))))))))).)))))).))))))

Structure
      u      c         g  a         g  g  u 
ucucag cuguga ccucuagaa ga gcacuuucu uu uu  
|||||| |||||| ||||||||| || ||||||||| || || g
agaguu gacauU GGAGAUUUU CU CGUGAAAga aa aa  
      u      A         A  A         a  g  a 


Annotation confidence Not enough data
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Genome context
chr19: 49030112-49030198 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from mml-mir-519c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-519c

Accession MIMAT0006386
Description Macaca mulatta mml-miR-519c mature miRNA
Sequence 54 - AAAGUGCAUCAUUUUAGAGGAU - 75
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8