miRBase entry: mml-mir-497

Stem-loop mml-mir-497


Accession
MI0007771
Description
Macaca mulatta mml-mir-497 precursor miRNA
Gene family
MIPF0000231; mir-497


Sequence

9208 reads, 72 reads per million, 9 experiments
ccaccccgguccugcucccgcccCAGCAGCACACUGUGGUUUGUacggcacuguggccacgucCAAACCACACUGUGGUGUUAGAGCGAGggugggggaggcaccgccgagg
...((.(((((((.((((((((((((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).....).))))))))))))....)))).))

Structure
cca  c    ----   g         - -----    G    C         U  --   ac 
   cc cggu    ccu cucccgccc C     AGCA CACA UGUGGUUUG ac  ggc  u
   || ||||    ||| ||||||||| |     |||| |||| ||||||||| ||  |||   
   gg gccg    gga ggggguggG G     UUGU GUGU ACACCAAAC ug  ccg  g
---  a    ccac   -         A CGAGA    G    C         c  ca   gu 


Annotation confidence Not enough data
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Genome context
chr16: 6978507-6978618 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-497
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-497-5p

Accession MIMAT0006359
Description Macaca mulatta mml-miR-497-5p mature miRNA
Sequence 24 - CAGCAGCACACUGUGGUUUGU - 44
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-497-3p

Accession MIMAT0026887
Description Macaca mulatta mml-miR-497-3p mature miRNA
Sequence 64 - CAAACCACACUGUGGUGUUAGAGCGAG - 90
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45