miRBase entry: mml-mir-494

Stem-loop mml-mir-494


Accession
MI0007768
Description
Macaca mulatta mml-mir-494 precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
1 open access papers mention mml-mir-494
(10 sentences)

Sequence

335 reads, 4 reads per million, 9 experiments
gauacucgaaggagAGGUUGUCCGUGUUGUCUUCUCUuuauuuaugaUGAAACAUACACGGGAAACCUCuucuuuaguauc
((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))

Structure
      c            G       -   C   -  Uuu 
gauacu gaaggagAGGUU UCCGUGU UGU UUC UC   a
|||||| |||||||||||| ||||||| ||| ||| ||   u
cuauga uuucuuCUCCAA GGGCACA ACA AAG ag   u
      -            A       U   -   U  uau 


Annotation confidence Not enough data
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Genome context
chr7: 163364071-163364151 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from mml-mir-494
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-494-3p

Accession MIMAT0006356
Description Macaca mulatta mml-miR-494-3p mature miRNA
Sequence 48 - UGAAACAUACACGGGAAACCUC - 69
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-494-5p

Accession MIMAT0026885
Description Macaca mulatta mml-miR-494-5p mature miRNA
Sequence 15 - AGGUUGUCCGUGUUGUCUUCUCU - 37
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45