miRBase entry: mml-mir-489

Stem-loop mml-mir-489


Accession
MI0007763
Description
Macaca mulatta mml-mir-489 precursor miRNA
Gene family
MIPF0000111; mir-489

Literature search
1 open access papers mention mml-mir-489
(7 sentences)

Sequence

1074 reads, 13 reads per million, 9 experiments
guggcagcuugguGGUCGUAUGUGUGGCGCCAUUUacuugaaccuuuaggaGUGACAUCACAUAUACGGCAGCuaaacuguuac
(((((((.(((((.(((((((((((((.(.((((..(((((....))))))))).).))))))))))))).))))).)))))))

Structure
       c     G             C C    Ua     a 
guggcag uuggu GUCGUAUGUGUGG G CAUU  cuuga c
||||||| ||||| ||||||||||||| | ||||  |||||  
cauuguc aauCG CGGCAUAUACACU C GUGa  ggauu c
       a     A             A A    --     u 


Annotation confidence Not enough data
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Genome context
chr3: 118803460-118803543 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-489
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-489-3p

Accession MIMAT0006349
Description Macaca mulatta mml-miR-489-3p mature miRNA
Sequence 52 - GUGACAUCACAUAUACGGCAGC - 73
Evidence experimental
Illumina [2]

Mature mml-miR-489-5p

Accession MIMAT0026883
Description Macaca mulatta mml-miR-489-5p mature miRNA
Sequence 14 - GGUCGUAUGUGUGGCGCCAUUU - 35
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45